Unlocking the Potential of RNAi and siRNA Modifications for Therapeutic Delivery

In the domain of molecular biology, groundbreaking discoveries often serve as the cornerstone for revolutionary advancements in the field of medicine. RNA interference (RNAi) stands as a testament to this transformative potential, with small interfering RNA (siRNA) taking center stage as a key player. In this article, we'll delve into the discovery of RNAi/siRNA, explore the various modifications of siRNA, and discuss the exciting potential of therapeutic delivery using siRNA.

The Emergence of siRNA

It wasn't until the early 2000s that the therapeutic value of siRNA became widely acknowledged. When introduced into a cellular environment, siRNA represents a subclass of RNA molecules that can trigger RNAi. These short double-stranded RNA sequences have a wide range of therapeutic applications since they are expertly crafted to target and silence specific genes.

Precision is one of siRNA's distinguishing characteristics. Unlike conventional medications, which frequently influence multiple pathways and have off-target effects, siRNA can be tailored to silence a single gene, providing a highly specific treatment approach. When treating genetic problems and other conditions having a known genetic cause, this level of precision is especially beneficial.

Schematic of important features and parameters in the small interfering RNA (siRNA) designFig 1. Schematic of important features and parameters in the small interfering RNA (siRNA) design. (Friedrich M, Aigner A. 2022)

siRNA Modifications for Improved Stability

While the potential of small interfering RNA (siRNA) in therapeutic applications is promising, it faces significant challenges, particularly in the domain of therapeutic delivery. The inherent instability of siRNA molecules when they travel through the complex environment of the bloodstream is a major cause for concern. Enzymes can quickly break down naked siRNA, resulting in a short half-life and decreased effectiveness. The scientific community has persistently researched different ways to strengthen and optimize siRNA for therapeutic applications in response to this strong barrier.

To make siRNA more stable, scientists have created chemical modifications. These modifications strengthen the siRNA's ability to bind to the target mRNA and protect it from degradation. Common modifications include the addition of methyl groups and sugar modifications, which enhance the pharmacokinetic properties of siRNA.

Another approach to improve siRNA stability is encapsulation in lipid nanoparticles. These nanoparticles not only protect siRNA from degradation but also enhance its cellular uptake. LNPs have proven to be effective in delivering siRNA to target tissues and are currently used in some FDA-approved siRNA-based therapies.

Conjugating siRNA with ligands that bind to specific receptors on target cells can improve targeted delivery. This approach not only enhances specificity but also reduces off-target effects. Various ligands, such as antibodies and aptamers, have been explored for this purpose.

Therapeutic Delivery of siRNA

With the advent of siRNA modifications addressing concerns surrounding stability and specificity, the therapeutic potential of siRNA has been unveiled with increasing clarity. Within this landscape of promise, we embark on a focused exploration of select domains where siRNA-based therapies are making remarkable strides:

Genetic Diseases: siRNA holds great promise for treating genetic diseases caused by a single mutated gene. Conditions like Huntington's disease and amyotrophic lateral sclerosis (ALS) are prime candidates for siRNA-based therapies. By silencing the mutant gene responsible for these diseases, siRNA can potentially slow down disease progression.

Cancer: Cancer is a complex disease that develops as a result of numerous mutations in genes. Targeting and silencing the genes that encourage tumor development and metastasis is possible with siRNA. This strategy, also known as oncogene silencing, has a lot of promise for the treatment of different cancers.

Neurological Diseases: The buildup of toxic proteins is a feature of neurodegenerative diseases including Alzheimer's and Parkinson's. siRNA can be used to target and degrade these harmful proteins, potentially slowing down disease progression.

Table 1. siRNA therapeutics approved for clinical use (Friedrich M, Aigner A. 2022)

Pathology/disease Drug name Delivery system Mode of application Target gene Status/important past or ongoing studies ClinicalTrials.gov identifier
Acute hepatic porphyria Givosiran (Givlaari®) GalNAc conjugate s.c. ALAS-1 Approved (FDA: 2019, EU: 2020)
Real-world clinical management and safety NCT04883905
Transthyretin-mediated amyloidosis Patisiran (Onpattro®) Lipid nanoparticle (DLin-MC3-DMA) i.v. TTR Approved (FDA: 2018; EU: 2018)
Phase IV observational studies NCT04561518, NCT04201418 (mutations)
Pregnancy surveillance program NCT05040373
Phase III, active, not recruiting NCT03997383
Hypercholesterolemia Inclisiran (Leqvio®) GalNAc conjugate s.c. PCSK9 Approved (EU: 2020; FDA: 2021)
Open-label extension NCT03814187
Phase III, completed NCT03397121
NCT03399370 NCT03400800
Phase III, recruiting NCT04765657
Retrospective multi-center analysis in Germany NCT05438069
Homozygous familial hyper-cholesterolemia and elevated low-density lipoprotein cholesterol Phase III, recruiting NCT04659863
Phase III, recruiting NCT04652726
Hypercholesterolemia
(Japanese participants with a high cardiovascular risk and elevated low-density lipoprotein cholesterol)
Phase II, active, not recruiting NCT04666298
Patients with cardiovascular disease and high cholesterol Phase II (ORION-3) Phase III (ORION-4) NCT03060577 NCT03705234
Atherosclerotic cardiovascular disease Phase III, recruiting NCT05030428
Transthyretin-mediated amyloidosis Vutrisiran (Amvuttra®) GalNAc conjugate s.c. TTR Approved (FDA: 2022)
Phase III, active, not recruiting NCT03759379 (HELIOS-A)
Phase III, active, not recruiting NCT04153149 (HELIOS-B)
Primary hyperoxaluria type 1 Lumasiran (Oxluma®) GalNAc conjugate s.c. GO Approved (FDA: 2020; EU: 2020)
Expanded access, approved for marketing NCT04125472
Prospective observational study (BONAPH1DE) recruiting NCT04982393
Phase III, active, not recruiting NCT04152200
Primary hyperoxaluria type 1 (children and adults) Phase III, completed NCT03681184
Primary hyperoxaluria type 1 (infants and young children) Phase III, active, not recruiting NCT03905694
Phase II (long-term safety), active, not recruiting NCT03350451

EU European Union, FDA US Food and Drug Administration, GalNAc N-acetylgalactosamine, i.v. intravenous, s.c. subcutaneous, siRNA small interfering RNA

Challenges

While siRNA-based therapies have made significant strides in recent years, they are not without challenges. One of the primary challenges is ensuring the safe and efficient delivery of siRNA to target cells. Researchers continue to work on refining delivery methods to maximize the therapeutic potential of siRNA.

Additionally, the long-term effects of siRNA-based therapies and potential off-target effects remain areas of concern. As these therapies advance, ongoing research and clinical trials are essential to address these issues and ensure their safety and efficacy.

Reference

  1. Friedrich M, Aigner A. Therapeutic siRNA: State-of-the-Art and Future Perspectives. BioDrugs. 2022; 36(5):549-571.

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